chr32_22

cmsearch-Rfam

Family :

sR5

Id:

RF01304

Type:

Gene; snRNA; snoRNA; CD-box;

Taxonomy:

Archaea;

Ontology:

GO:0006396 RNA processingRF01304

Description:

not description

Score:

25.6

E-value:

0.0092

From sequence:

1006958

To sequence:

1007025

Alignments:

                                                                              NC
                  ::::::::::::::::::..:::::::::::::::::::<<<__~~~~~~>>>:::::: CS
  RF01304       1 UaGAUGAUGAgcgCCaUc..GAAaCUGAcugAUGAUGAacGgaU*[ 2]*cUggCUGAu 53     
                   +GAUGAUGAG++  AU    AA CUGA  GAUGA +A+:G:+U      :U:+CUGA 
    chr32 1006958 GUGAUGAUGAGGAUAAUGacAAAGCUGAGAGAUGAAAAGUGCCU*[15]*GUGACUGAG 1007025
                  ***********9998887678*********************87...*..********* PP

RNAfold
>chr32_22
UGAUGAUGAGGAUAAUGACAAAGCUGAGAGAUGAAAAGUGCCUCUGAGUC
CCAAAUUGGUGACUGAG
.......((((.............................))))(.(((((((...))).)))).). ( -8.80)

Length sequence

: 67

Length match:

66