chr32_7

cmsearch-Rfam

Family :

mir-2518

Id:

RF01944

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF01944

Description:

not description

Score:

27.7

E-value:

0.0048

From sequence:

634195

To sequence:

634082

Alignments:

                         v                                                                     v     NC
                 ::::::::((((,,,,,,,,,,,,,<____>,,<<<<<<<<-<<<<<<~~~~~~>>>>>>>>>>>>>>,,,,,,,)))):::: CS
  RF01944      1 cggccAAcGGGCAGCCACACAcAcACACACGACCGgauCGaaCCCGcu*[28]*agCGGGuCGaucCGAGCCAUAGCCCAgcc 105   
                  GGC AAC ::CA   ACACA ACACACA GACCG:::C:  CCC:C:      :G:GGG :G:::CG G  A  G::  G  
    chr32 634195 GGGCUAACACCCAC--ACACAUACACACAGGACCGCCCCCUUCCCCCC*[39]*GGGGGGGGGGGGCGGGAGAAUGGGGGGUU 634082
                 ************85..5556666699999****************997...*..79999999********************* PP

RNAfold
>chr32_7
ACCCCCCAUUCUCCCGCCCCCCCCCCCCAUUCGUUCUAAGAGACAACUCU
CAGUGGCGGGGGGGGGGGGGGGGAAGGGGGCGGUCCUGUGUGUAUGUGUG
UGGGUGUUAGCCC
(((((((.(((((((.(((((((((((((((........((((....))))))))).)))))))))).))))))).)))).))).................((((....)))) (-66.80)

Length sequence

: 113

Length match:

112