chr32_8

cmsearch-Rfam

Family :

mir-268

Id:

RF00834

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00834

Description:

not description

Score:

31.2

E-value:

0.0034

From sequence:

763261

To sequence:

763365

Alignments:

                                                                                                                  NC
                 ::::::::::::<<<<<<<-<<<<<<-<<<<<<<<<---<-<<<<<___~~~~~~>>>>>->>>>>>>>>>-.>>>>>>->>>>>>>::::::::: CS
  RF00834      1 GGAAGUGgCUUUgaaGcgGCaagaauUaGaaGcaGuUUGGuGucgGaca*[ 5]*CcgaCuCaCugCuuCuU.guuuuuUCcgCuucuUuUuCUuu 94    
                 GGAA        :A:G:GG AA:AA: A AAG:::U   : ::::GACA      C:::: :A:::CUU UU :UU:UUUCC:C:U:UUUU CUUU
    chr32 763261 GGAAA------ACAGGGGGAAAAAAA-AUAAGACAU---CCACACGACA*[24]*CGUGUGGAUGUCUUAUUuUUUUUUUCCCCCUGUUUUCCUUU 763364
                 ***97......5*******6666665.777777777...4555555544...8..55555557777777776244555679*************** PP

                   NC
                 : CS
  RF00834     95 u 95    
                  
    chr32 763365 A 763365
                 * PP

>>

RNAfold
>chr32_8
GAAAACAGGGGGAAAAAAAAUAAGACAUCCACACGACAGUUUUACCUUUG
AUGCGAAACUGUCGUGUGGAUGUCUUAUUUUUUUUUUCCCCCUGUUUUCC
UUUA
(((((((((((((((((((((((((((((((((((((((((((...........))))))))))))))))))))))))..)))))))))))))))))))..... (-66.80)

Length sequence

: 104

Length match:

103