chr32_9

cmsearch-Rfam

Family :

mir-299

Id:

RF00756

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00756

Description:

not description

Score:

32.5

E-value:

0.00028

From sequence:

270736

To sequence:

270813

Alignments:

                  v   vv                                                  vv   v  NC
                 <<<<<<<<<<<<<<<<<<<<<<<<<<<<__~~~~~~>>>>>>>>>>>>>>>>>>>>>>>>>>>> CS
  RF00756      1 AAGAaguGGuUuACCGUCCCACAuacAuuU*[ 5]*aUguaUGUGGGACGGUaAaCCgcuUCUU 63    
                 A G A+ GG: ::CC: C CACA:ACA:+       :UGU:UGUG G :GG:: :CC  U C U
    chr32 270736 ACGGAUCGGCACGCCCACACACACACACAC*[22]*GUGUGUGUGUGUGGGCGUGCC--UUCUU 270813
                 ***************************975...9..9********************..***** PP

>>

RNAfold
>chr32_9
CGGAUCGGCACGCCCACACACACACACACAGGCAGGCCCAAGUCCGCCUG
UGUGUGUGUGUGUGGGCGUGCCUUCUU
.(((..(((((((((((((((((((((((((((.(((....))).))))))))))))))))))))))))))).))). (-65.80)

Length sequence

: 77

Length match:

76