chr33_10

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

30.2

E-value:

0.0061

From sequence:

273564

To sequence:

273457

Alignments:

                      v                  v v                      v v                 v                 NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<<-<---<__~~~~~~>-->>>>>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgGgAGAAAgua*[ 4]*cagCcCcUggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                  G::: +G::  G::GGGGGGG:U : G: GAA G A      CAGC:C : :CCCCCCC::C  ::C  :::C+ G +C++  A 
    chr33 273564 GGAAUCGGGGGGGGGGGGGGGGGUAGAGAGGAAUGGA*[28]*CAGCUCGCACCCCCCCCUCCUUUUCACACUCUCGCCCUCUGAG 273457
                 *********************************9865...9..999**************************************** PP

>>

RNAfold
>chr33_10
UCAGAGGGCGAGAGUGUGAAAAGGAGGGGGGGGUGCGAGCUGCACGGAGC
AAUCGAUCGUCCGCAGCAUCUCCAUUCCUCUCUACCCCCCCCCCCCCCCC
CGAUUCC
...........((((.......((.((((((((((.(((((((..(((...........)))))))).............)))))))))))).)).......)))). (-36.00)

Length sequence

: 107

Length match:

106