chr33_12

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

30.1

E-value:

0.0063

From sequence:

624649

To sequence:

624578

Alignments:

                           v vvvvv v     vvv              vvv    v vvvvv v                      NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<<-<-~~~~~~>>>>>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgGgAGA*[12]*CcCcUggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                 U:GGG: G:G G+ AGGG GGG     GG G       CCCCU  CCC C     C C:CC:CCC:C    C AAAA+
    chr33 624649 UAGGGGCGAGAGAGAGGGUGGG-----GGGGG*[11]*CCCCUC-CCCUC-----CCCUCCCCCCUCAAAACAAAAAA 624578
                 ******9999654443333333.....33332...4..333333.33333.....449******************** PP

>>

RNAfold
>chr33_12
CUGCCUUUUUUGUUUUGAGGGGGGAGGGGAGGGGAGGGGAGUCAUUGCCC
CCCCCCCCACCCUCUCUCUCGCCCCUAUGGAAA
...((......((...((((((((..(((.((((.((((........)))))))))))..))))))))..))......))... (-39.30)

Length sequence

: 83

Length match:

70