chr33_20

cmsearch-Rfam

Family :

mir-785

Id:

RF02244

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF02244

Description:

not description

Score:

31.9

E-value:

0.001

From sequence:

619807

To sequence:

619892

Alignments:

                                        v    v                                        v    v                     NC
                 <<<<-<<<------<<<<<<<<<<<<<-<--<<<<<<<<<<_________________>>>>>>>>>>->->>>>>>>>>>>>>--->>>->>>> CS
  RF02244      1 gCucUuuuUCuCauCCgUcagCaCAgAAuuuUUcaCUuACAcAaAauuaaauAaauGAUGUaAGugAAUauUcUGuGuugAuGGugAaaaugaGc 95    
                 :C:C ::: C    CC:::::CA A:A +  ::CA:::A:A A A  UA+A+A+AU AU:U:::UG::   U:U UG:::::GG   :::UG:G:
    chr33 619807 ACACCCACAC----CCACACACACACACACGCACAUACAUAUACACAUAUACAUAU-AUAUGUAUGUGG-GUGUAUGUGUGUGG---GUGUGUGU 619892
                 ****987744....666677777766622345555555555555555566666653.455555555554.36777777777776...777***** PP

>>

RNAfold
>chr33_20
GCAUACACCCACACCCACACACACACACACGCACAUACAUAUACACAUAU
ACAUAUAUAUGUAUGUGGGUGUAUGUGUGUGGGUGUGUGUCUCUG
......((.((((((((((((((...((((.((((((((((((............)))))))))))).)))).)))))))))))))).))..... (-48.30)

Length sequence

: 95

Length match:

84