chr33_21

cmsearch-Rfam

Family :

mir-785

Id:

RF02244

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF02244

Description:

not description

Score:

30.9

E-value:

0.002

From sequence:

619892

To sequence:

619807

Alignments:

                                                 v                                 v                             NC
                 <<<<-<<<------<<<<<<<<<<<<<-<--<<<<<<<<<<_________________>>>>>>>>>>->->>>>>>>>>>>>>--->>>->>>> CS
  RF02244      1 gCucUuuuUCuCauCCgUcagCaCAgAAuuuUUcaCUuACAcAaAauuaaauAaauGAUGUaAGugAAUauUcUGuGuugAuGGugAaaaugaGc 95    
                 :C:C :::      CC:::::CA A:A :  : :AC:UA A A+   UA+ U +A  AU UA:GU: :U: U:U UG:::::GG + ::: G:G:
    chr33 619892 ACACACAC------CCACACACAUACACCCACAUACAUAUAUAUGUAUAUGUGUA-UAUGUAUGUGCGUG-UGUGUGUGUGUGGGU-GUGGGUGU 619807
                 *******9......*********99996655555555555555433333322222.24666666666665.99999********98.99****** PP

RNAfold
>chr33_21
GCAUACACCCACACCCACACACACACACACGCACAUACAUAUACACAUAU
ACAUAUAUAUGUAUGUGGGUGUAUGUGUGUGGGUGUGUGUCUCUG
......((.((((((((((((((...((((.((((((((((((............)))))))))))).)))).)))))))))))))).))..... (-48.30)

Length sequence

: 95

Length match:

84