chr33_22

cmsearch-Rfam

Family :

mir-885

Id:

RF01015

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF01015

Description:

not description

Score:

28.9

E-value:

0.0039

From sequence:

279851

To sequence:

279935

Alignments:

                                                                                      NC
                 <<<--<<<<<<<<<<<<<<<<-<<<<<<<<~~~~~~>>>>>>->>>>>>>>>>>>>>>>>>-->>>:: CS
  RF01015      1 CcGcaCUCUuUCCacUAcgCcAccCUGCcU*[12]*AgGCAGCgggGcgUAguGGAaAGAGCACgGGU 74    
                 C::  CUCU:U:C::U:::C:   CU CC        GG AG   :G:::A::G:A:AGAG  ::GG 
    chr33 279851 CUCGUCUCUCUUCCUUCUCCU---CUCCCU*[29]*GGGGAG---GGGAGAAGGAAGAGAGACGAGGG 279935
                 ****************99999...666654...8..455566...99999****************** PP

>>

RNAfold
>chr33_22
UCGUCUCUCUUCCUUCUCCUCUCCCUGCUUCGAGCUCUGCUCACAGAGCA
AAAGAGGGGAGGGGAGAAGGAAGAGAGACGAGGG
((((((((((((((((((((((((((.(((...((((((....))))))..))).))))))))))))))))))))))))))... (-63.60)

Length sequence

: 84

Length match:

83