chr33_27

cmsearch-Rfam

Family :

TB10Cs2H1

Id:

RF01525

Type:

Gene; snRNA; snoRNA; HACA-box;

Taxonomy:

Eukaryota;

Ontology:

GO:0006396 RNA processingRF01525

Description:

not description

Score:

81.6

E-value:

3.3e-16

From sequence:

262789

To sequence:

262857

Alignments:

                                                                                       NC
                 :<<-<<<<<-----<<<_______...__________________>>>------>>>>>->>::::::: CS
  RF01525      1 cGGCGuUGUCGGUUGGGCgaGugu...uaCAucUugUaggUaCaACCCUAUCUCGCAaCCCCcAGAauc 66    
                 CGG+GUUGUCGGUUGGGCG+G++U   U+CA+CU+GUAGGUAC+ACCCUAUCUCGCAACCCCCAGA+UC
    chr33 262789 CGGUGUUGUCGGUUGGGCGUGACUccuUGCACCUCGUAGGUACGACCCUAUCUCGCAACCCCCAGAUUC 262857
                 ********************************************************************* PP

>>

RNAfold
>chr33_27
GGUGUUGUCGGUUGGGCGUGACUCCUUGCACCUCGUAGGUACGACCCUAU
CUCGCAACCCCCAGAUUC
((.(((((.(((.(((((((....(((((.....))))))))).))).)))..)))))))........ (-19.30)

Length sequence

: 68

Length match:

67