chr33_31

cmsearch-Rfam

Family :

TB10Cs3H2

Id:

RF01532

Type:

Gene; snRNA; snoRNA; HACA-box;

Taxonomy:

Eukaryota;

Ontology:

GO:0006396 RNA processingRF01532

Description:

not description

Score:

80.2

E-value:

1.5e-14

From sequence:

102550

To sequence:

102478

Alignments:

                                                                                           NC
                 ::::::::<<<<<.-<<-----<<<<<-<<<<_..________>>>>.--->>>>>---->>->>>>>::::: CS
  RF01532      1 UGcuagCaGCcgC.uCCGGGCAGGAugaCGCCC..GuGuccuUGGCG.uugcgUCCAAUCGGUGcgGCGAGAu 69    
                 UGCU +C+GC::C UCCGGGCAGGAU:ACGCCC  G+G CCUUGGCG +UG:GUCCAAUCGGUG::GCGAGAU
    chr33 102550 UGCUGCCUGCACCuUCCGGGCAGGAUGACGCCCuuGCGGCCUUGGCGaCUGUGUCCAAUCGGUGGUGCGAGAU 102478
                 ************************************************************************* PP

RNAfold
>chr33_31
UCUCGCACCACCGAUUGGACACAGUCGCCAAGGCCGCAAGGGCGUCAUCC
UGCCCGGAAGGUGCAGGCAGCA
...........((((((....))))))...(.(((.....))).)...(((((((....)).)))))..... (-24.00)

Length sequence

: 72

Length match:

71