chr33_33

cmsearch-Rfam

Family :

TB10Cs3H2

Id:

RF01532

Type:

Gene; snRNA; snoRNA; HACA-box;

Taxonomy:

Eukaryota;

Ontology:

GO:0006396 RNA processingRF01532

Description:

not description

Score:

80.2

E-value:

1.5e-14

From sequence:

89468

To sequence:

89396

Alignments:

                                                                                          NC
                ::::::::<<<<<.-<<-----<<<<<-<<<<_..________>>>>.--->>>>>---->>->>>>>::::: CS
  RF01532     1 UGcuagCaGCcgC.uCCGGGCAGGAugaCGCCC..GuGuccuUGGCG.uugcgUCCAAUCGGUGcgGCGAGAu 69   
                UGCU +C+GC::C UCCGGGCAGGAU:ACGCCC  G+G CCUUGGCG +UG:GUCCAAUCGGUG::GCGAGAU
    chr33 89468 UGCUGCCUGCACCuUCCGGGCAGGAUGACGCCCuuGCGGCCUUGGCGaCUGUGUCCAAUCGGUGGUGCGAGAU 89396
                ************************************************************************* PP

>>

RNAfold
>chr33_33
UCUCGCACCACCGAUUGGACACAGUCGCCAAGGCCGCAAGGGCGUCAUCC
UGCCCGGAAGGUGCAGGCAGCA
...........((((((....))))))...(.(((.....))).)...(((((((....)).)))))..... (-24.00)

Length sequence

: 72

Length match:

71