chr33_38

cmsearch-Rfam

Family :

TB9Cs4H1

Id:

RF01557

Type:

Gene; snRNA; snoRNA; HACA-box;

Taxonomy:

Eukaryota;

Ontology:

GO:0006396 RNA processingRF01557

Description:

not description

Score:

74.5

E-value:

1.3e-14

From sequence:

636090

To sequence:

636155

Alignments:

                                                                                     NC
                 :::<<<<<<-------<<<<<--<<<<__.._____>>>>---...>>>>>------->>>>>>::: CS
  RF01557      1 uGAGGUCguCuGUGUACCCCgUGCGcCCc..CUuGUGgCGuAc...cGGGGAAUGGAaacGACCGAG 62    
                 +GAGGUC:U UGUGUACCCC:UGCG:CCC  CU GUG:CG+AC   :GGGGAAUGGA+A:GACCGAG
    chr33 636090 CGAGGUCUU-UGUGUACCCCGUGCGUCCCcaCUCGUGACGCACacaUGGGGAAUGGACAGGACCGAG 636155
                 *********.9******************************************************** PP

>>

RNAfold
>chr33_38
GAGGUCUUUGUGUACCCCGUGCGUCCCCACUCGUGACGCACACAUGGGGA
AUGGACAGGACCGAG
..((((((.((.((((((((((((((......).)))))))....))))..)).))))))))... (-27.00)

Length sequence

: 65

Length match:

64