chr33_44

cmsearch-Rfam

Family :

tRNA-Sec

Id:

RF01852

Type:

Gene; tRNA;

Taxonomy:

Eukaryota; Bacteria; Viruses; Archaea;

Ontology:

GO:0030533 triplet codon-amino acid adaptor activity

Description:

not description

Score:

45.6

E-value:

6.4e-07

From sequence:

105993

To sequence:

105920

Alignments:

                         v      v      v                                                 v         NC
                 (((((((((,,<<<<<<____>>>>>><<<<<<_______>>>>>>,<~~~~~~>,,<<<<_______>>>>))))))))) CS
  RF01852      1 GggggggcgaucggcccUGGUgggccguccGGgCUUCAAAcCCggaGg*[16]*cgGggGGUUCGAUUCCcccgccccccC 91    
                   ::::::   :::: :UGG : ::::U::GG:CUUC AA:CC::AG:      : G:GGGUUCGA UCCC: ::::::  
    chr33 105993 UGCUCCAGU-GGCCUAAUGGAUAAGGCUUUGGACUUCUAAUCCAAAGA*[ 0]*UUGCGGGUUCGAAUCCCGCCUGGAGUA 105920
                 *******76.9************************************6......589************************ PP

>>

RNAfold
>chr33_44
GCUAAAACUACUCCAGGCGGGAUUCGAACCCGCAAUCUUUGGAUUAGAAG
UCCAAAGCCUUAUCCAUUAGGCCACUGGAGCACUGUAACUU
..........(((((((((((.......)))))....((((((((...))))))))((((........))))..))))))........... (-29.90)

Length sequence

: 91

Length match:

72