chr35_11

cmsearch-Rfam

Family :

mir-558

Id:

RF01021

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF01021

Description:

not description

Score:

29.2

E-value:

0.0066

From sequence:

1020598

To sequence:

1020524

Alignments:

                                           v      v      v      v                   NC
                  ::::::::<<-<<<-<<<<<<-<<<<<<<<<<<~~~~~~>>>>>>>>>>>>>>>>>->>>->>:: CS
  RF01021       1 gUGUGUGUGcGcguguGuGguUauuuuGGuaca*[35]*uguaCCaaaauacCaCaAacgGgCUG 94     
                  GUGUGUGUG:G:GUGUGUG:: ::U UG :::        ::: CA A::::CACA AC:G:C  
    chr35 1020598 GUGUGUGUGUGUGUGUGUGUG-UGUGUGUGGUU*[17]*UACCGCAGACACACACACACGGACAU 1020524
                  ******************887.45555444443...7..34444555555788************ PP

>>

RNAfold
>chr35_11
ACAUUCGAGAUGUCCGUGUGUGUGUGUCUGCGGUAGACACCGAUACCCAC
ACAACCACACACACACACACACACACACACACACACACAGGCAC
..........((((.((((((((((((.((.((((........))))..........................)).)))))))))))).)))). (-25.70)

Length sequence

: 94

Length match:

73