chr35_17

cmsearch-Rfam

Family :

TB9Cs2H1

Id:

RF01554

Type:

Gene; snRNA; snoRNA; HACA-box;

Taxonomy:

Eukaryota;

Ontology:

GO:0006396 RNA processingRF01554

Description:

not description

Score:

91.9

E-value:

4.8e-19

From sequence:

1587762

To sequence:

1587827

Alignments:

                                                                                       NC
                  <<<<<<<---------<<<<---<<<<__________>>>>------>>>>------>>>>>>>:::: CS
  RF01554       1 GGcCCACAUUGGAGUUGUGuCuUGGcCucAuUgCggUGgCCuUGucUgCACACUCACGUGGgCCaAGA 68     
                  GGCCCACAUUGGAGUUGUGUCUUGGCC CA  GCGGUGGCC+UG CUGCACACUCACGUGGGCCAAGA
    chr35 1587762 GGCCCACAUUGGAGUUGUGUCUUGGCCGCA--GCGGUGGCCCUGCCUGCACACUCACGUGGGCCAAGA 1587827
                  ******************************..************************************ PP

RNAfold
>chr35_17
GGCCCACAUUGGAGUUGUGUCUUGGCCGCAGCGGUGGCCCUGCCUGCACA
CUCACGUGGGCCAAGAG
(((((((....((((.(((((..((((((....))))))..)...))))))))..)))))))..... (-33.60)

Length sequence

: 67

Length match:

64