chr35_3

cmsearch-Rfam

Family :

mir-299

Id:

RF00756

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00756

Description:

not description

Score:

31.6

E-value:

0.00054

From sequence:

355993

To sequence:

356086

Alignments:

                   v  v                                                     v  v   NC
                 <<<<<<<<<<<<<<<<<<<<<<<<<<<<___~~~~~~>>>>>>>>>>>>>>>>>>>>>>>>>>>> CS
  RF00756      1 AAGAaguGGuUuACCGUCCCACAuacAuuUU*[ 4]*aUguaUGUGGGACGGUaAaCCgcuUCUU 63    
                 AA A: ::::::  CG: CCACA:A A:+U       :U U:UGUGG :CG  :::::: :U UU
    chr35 355993 AACAGCAAAACAUGCGCACCACACAUAUAUA*[35]*GUGUGUGUGGUGCGCAUGUUUUCCUCUU 356086
                 ****************************986...*..**************************** PP

>>

RNAfold
>chr35_3
ACAGCAAAACAUGCGCACCACACAUAUAUAUAUAUAUUUAUAUUUAUAUA
GAUAUAUAGAUGUGUGUGUGUGUGGUGCGCAUGUUUUCCUCUU
..((.(((((((((((((((((((((((((((((((((((((....)))))))))))....)))))))))))))))))))))))))).))... (-48.80)

Length sequence

: 93

Length match:

92