chr35_5

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

33.1

E-value:

0.0011

From sequence:

1919094

To sequence:

1919233

Alignments:

                                                                                  NC
                  :<<<<<-<<<<<<<<<<<<<<<<~~~~~~>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772       1 UGGggcaGggGGGcaGgggGGGc*[27]*gCCCcccCugCCCccCCgccCCcugUuccaaaau 84     
                   GGG::+G:GGG:::G:G:GGG:      :CCC:C:C:::CCC:CC::CCC+   ++++   +
    chr35 1919094 GGGGAGGGAGGGAGGGAGGGGGG*[83]*CCCCUCUCCCUCCCUCCCUCCCUACGCUUCCUCC 1919233
                  **********************9...*..9********************************* PP

>>

RNAfold
>chr35_5
GGGAGGGAGGGAGGGAGGGGGGAAUUCACAUCCCGCUCUAUAUGUUUUCU
CUUUCUGCUCGCUUGUAUGUUGGAGUGCAUUUGUACGCAGCGUUUUCGUG
CUCCGCCCCUCUCCCUCCCUCCCUCCCUACGCUUCCUCC
((((((((((((((((((((((....(((....((((((((((((...((((..((((......))).)..)))).))))..))).).)))).....))).....))))))))))))))))))))))............ (-68.00)

Length sequence

: 139

Length match:

138