chr35_6

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

31.6

E-value:

0.0027

From sequence:

1919222

To sequence:

1919083

Alignments:

                                    v                 v                              NC
                  :<<<<<-<<<<<<<<<<<<<<<<-<~~~~~~>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772       1 UGGggcaGggGGGcaGgggGGGcUc*[24]*ggCCCcccCugCCCccCCgccCCcugUuccaaaau 84     
                   GGG::+G:GGG:::G:G GGG: :      ::CCC C:C:::CCC:CC::CCCC      AA  +
    chr35 1919222 AGGGAGGGAGGGAGGGAGAGGGGCG*[80]*UCCCCCCUCCCUCCCUCCCUCCCCCCCAAAAAUGA 1919083
                  **********************976...9..589999***************************** PP

>>

RNAfold
>chr35_6
CAUUUUUGGGGGGGAGGGAGGGAGGGAGGGGGGAAUUCACAUCCCGCUCU
AUAUGUUUUCUCUUUCUGCUCGCUUGUAUGUUGGAGUGCAUUUGUACGCA
GCGUUUUCGUGCUCCGCCCCUCUCCCUCCCUCCCUCCCU
.......(((((((((((((((((((.(((.(((...(((....((((((((((((...((((..((((......))).)..)))).))))..))).).)))).....))).))).)))))))))))))))))))))). (-70.50)

Length sequence

: 139

Length match:

138