chr35_7

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

32.1

E-value:

0.0019

From sequence:

553675

To sequence:

553758

Alignments:

                          v v                v                v                v v                     NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<<-<---<______>-->>>>>>.>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgGgAGAAAguaUuUacagCcCcUg.gCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                  : :G AG: G G:AG:G:GG:: :AGG AG AA:U+U   :  C CCU: ::CC:C:CU:C C :CC C: :CU  +CC+   +
    chr35 553675 AACAGGAGAGGGGGAGGGGGGAG-GAGGCAGCAAGUGUGACUGCCUCCUCcCUCCUCUCUCCACGUCCUCUGUCUCACCCCUGCA 553758
                 **********************9.99999*********99999999999879********************************* PP

>>

RNAfold
>chr35_7
ACAGGAGAGGGGGAGGGGGGAGGAGGCAGCAAGUGUGACUGCCUCCUCCC
UCCUCUCUCCACGUCCUCUGUCUCACCCCUGCA
.((((((((((((((((((((((((((((((....)).))))))))))))))))))).......)))))........)))).. (-50.30)

Length sequence

: 83

Length match:

82