chr35_8

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

30.8

E-value:

0.0043

From sequence:

553736

To sequence:

553673

Alignments:

                        vv v                                   v vv                   NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<~~~~~~>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcA*[22]*UggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                 UGG:G:++GG GG:AGG:GG ::UCA      UG:: CC:CCU:CC C  C:C:CCCU U+C+   A+
    chr35 553736 UGGAGAGAGGAGGGAGGAGGCAGUCA*[ 4]*UGCUGCCUCCUCCCCC--CUCCCCCUCUCCUGUUAC 553673
                 *******999**************99...9..99***********977..57799999999******* PP

>>

RNAfold
>chr35_8
GACGACGACGUAACAGGAGAGGGGGAGGGGGGAGGAGGCAGCAAGUGUGA
CUGCCUCCUCCCUCCUCUCUCCACGUCCUCUGU
...((.(((((....(((((....(((((((((((((((((((....)).))))))))))))))))))))))))))).))... (-50.50)

Length sequence

: 83

Length match:

62