chr36_11

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

29.9

E-value:

0.0072

From sequence:

2108376

To sequence:

2108295

Alignments:

                      vv               v   v                      v  v               vv                NC
                  :<<<<<-<<<<<<<<<<<<<<<<-<<<<<-<---<______>-->>>>>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772       1 UGGggcaGggGGGcaGgggGGGcUcAgGgAGAAAguaUuUacagCcCcUggCCCcccCugCCCccCCgccCCcugUuccaaaau 84     
                   GG:  + :G:G:::G:::GG : : G:G GA AG A    C+GCC:C :: CC:::C:::C:C:  G+:CC+UG  +++ A U
    chr36 2108376 AGGA--GGGGAGAGGGGAGGGAGAGAGAGCGAGAGGAAGCCCUGCCUCCCCCCCUCUCUCUCUCUUAGACCCUUGCGUUUUACU 2108295
                  ***7..78888888888888888888888888888888888*************************999*************** PP

>>

RNAfold
>chr36_11
AGUAAAACGCAAGGGUCUAAGAGAGAGAGAGGGGGGGAGGCAGGGCUUCC
UCUCGCUCUCUCUCCCUCCCCUCUCCCCUCCUC
....................(((.(.((((((((((((((.(((((........))))).)))))).)))))))).))))... (-39.30)

Length sequence

: 83

Length match:

80