chr36_14

cmsearch-Rfam

Family :

mir-558

Id:

RF01021

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF01021

Description:

not description

Score:

30.4

E-value:

0.0032

From sequence:

1698956

To sequence:

1699027

Alignments:

                                           v v    v          v    v v                   NC
                  ::::::::<<-<<<-<<<<<<-<<<<<<<<<<<<<~~~~~~>>>>>>>>>>>>>>>>>>>->>>->>:: CS
  RF01021       1 gUGUGUGUGcGcguguGuGguUauuuuGGuacaGc*[31]*gCuguaCCaaaauacCaCaAacgGgCUG 94     
                  GUG GUGUG:G:GUGUGUG::U: : : GU:: GC      GC ::AC : : :::CACA AC: :CU 
    chr36 1698956 GUGCGUGUGUGUGUGUGUGUGUGUGUGUGUGUAGC*[ 9]*GCAGCACCCUCGUCACACAGACAUACUU 1699027
                  ******************************99887...7..7889************************ PP

>>

RNAfold
>chr36_14
CGCUGUGUGUGUGCGUGUGUGUGUGUGUGUGUGUGUGUGUGUAGCCUUUG
AGCAGCAGCACCCUCGUCACACAGACAUACUUUUUAACCUUUC
(((.........))).((((((.((((((((.(.((((.(((.((......)).))))))).).)).)))))).))))))............. (-28.30)

Length sequence

: 93

Length match:

70