chr36_15

cmsearch-Rfam

Family :

mir-574

Id:

RF00929

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00929

Description:

not description

Score:

39.3

E-value:

0.001

From sequence:

2352739

To sequence:

2352835

Alignments:

                           v   v              v          v             v  v            NC
                  <<<<<<<<<<<<-<-<<<<<<<<<<<<<<<<~~~~~~>>>>>>>>>>>>>>>>>>>>>>>>>>>>>:: CS
  RF00929       1 cGcGGGCGuGuGAGUGuGuGuGuguGaGuGu*[15]*aCgCuCaugCaCaCaCCCaCaCGCCCgCgCu 77     
                  :G G:G GU :G   GUGUGUG::UG:G GU      AC C:CA::CACACAC C: AC C:C C:C 
    chr36 2352739 UGUGUGUGUAUGUGGGUGUGUGUGUGUGCGU*[35]*ACACACACACACACACACGCACGCACGCACA 2352835
                  *********9998888888888888888887...9..8999999*********9************** PP

>>

RNAfold
>chr36_15
GUGUGUGUAUGUGGGUGUGUGUGUGUGCGUCCUGGGACCUUCUCUCGAUC
GGUGCAGCCACAGUCACACACACACACACACACGCACGCACGCACA
((((((((.((((.(((((((((((((.((.((((((((.((....))..)))....)).)))..)).))))))))))))).)))).)))))))). (-49.50)

Length sequence

: 96

Length match:

95