chr36_16

cmsearch-Rfam

Family :

mir-574

Id:

RF00929

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00929

Description:

not description

Score:

49.0

E-value:

7.3e-06

From sequence:

2352835

To sequence:

2352739

Alignments:

                      v   v                                                v   v       NC
                  <<<<<<<<<<<<-<-<<<<<<<<<<<<<<<<~~~~~~>>>>>>>>>>>>>>>>>>>>>>>>>>>>>:: CS
  RF00929       1 cGcGGGCGuGuGAGUGuGuGuGuguGaGuGu*[15]*aCgCuCaugCaCaCaCCCaCaCGCCCgCgCu 77     
                  :G:G G:  GUG GUGUGUGUG::UG:GUGU      ACGC:CA::CACACACCCAC  :C C:C:C 
    chr36 2352835 UGUGCGUGCGUGCGUGUGUGUGUGUGUGUGU*[35]*ACGCACACACACACACCCACAUACACACACA 2352739
                  ******************************9...*..9****************************** PP

>>

RNAfold
>chr36_16
GUGUGUGUAUGUGGGUGUGUGUGUGUGCGUCCUGGGACCUUCUCUCGAUC
GGUGCAGCCACAGUCACACACACACACACACACGCACGCACGCACA
((((((((.((((.(((((((((((((.((.((((((((.((....))..)))....)).)))..)).))))))))))))).)))).)))))))). (-49.50)

Length sequence

: 96

Length match:

95