chr36_19

cmsearch-Rfam

Family :

TB10Cs1H1

Id:

RF01522

Type:

Gene; snRNA; snoRNA; HACA-box;

Taxonomy:

Eukaryota;

Ontology:

GO:0006396 RNA processingRF01522

Description:

not description

Score:

92.5

E-value:

4e-20

From sequence:

956127

To sequence:

956196

Alignments:

                                                                                          NC
                 ::<<<<<<.------<<<<<<<<<____________________>>>>>>>>>------->>>>>>:::::: CS
  RF01522      1 CAUCCCcu.UUAAUAgCGAGcgGcCcaugugUGCAUCuCCGCAAgCcgCUCGuCUACACCggGGGAgAGAgA 71    
                 CAUCCC:U UUAAUAGCGAGC:G:CCA+  +UGCAUC+CCGCAA:C:GCUCGUCUACACCG:GGGAGAGAGA
    chr36 956127 CAUCCCUUgUUAAUAGCGAGCAGUCCAC--CUGCAUCCCCGCAAGCUGCUCGUCUACACCGGGGGAGAGAGA 956196
                 ****************************..****************************************** PP

>>

RNAfold
>chr36_19
CAUCCCUUGUUAAUAGCGAGCAGUCCACCUGCAUCCCCGCAAGCUGCUCG
UCUACACCGGGGGAGAGAGAG
..(((((((....(((((((((((.....(((......))).)))))))).)))...)))))))....... (-26.00)

Length sequence

: 71

Length match:

68