chr36_22

cmsearch-Rfam

Family :

TB10Cs1H2

Id:

RF01523

Type:

Gene; snRNA; snoRNA; HACA-box;

Taxonomy:

Eukaryota;

Ontology:

GO:0006396 RNA processingRF01523

Description:

not description

Score:

80.3

E-value:

8.7e-17

From sequence:

957384

To sequence:

957450

Alignments:

                                                                                     NC
                 :<<<<<<<<.-----<<<<<<..-<<<<<_________>>>>>.>>>>>>--->>>>->>>>::::: CS
  RF01523      1 AGCgCUCAU.UUCAAGCcGCg..CGgGCaUaaucgUGuuGCcC.cGCgGUCGGGUGAcGcGCGAGAc 63    
                 AGCGCUCAU UUCAAGCCGC:  CGGGC:U+ U++UG+:GCCC :GCGGUCGGGUGA+GCGCGAGA+
    chr36 957384 AGCGCUCAUuUUCAAGCCGCAcgCGGGCCUGCUGCUGGUGCCCcUGCGGUCGGGUGAUGCGCGAGAG 957450
                 ******************************************************************* PP

RNAfold
>chr36_22
GCGCUCAUUUUCAAGCCGCACGCGGGCCUGCUGCUGGUGCCCCUGCGGUC
GGGUGAUGCGCGAGAG
.(((.((((.((..((((((.(.((((((......)).)))))))))))..)).)))).))).... (-28.60)

Length sequence

: 66

Length match:

65