chr36_25

cmsearch-Rfam

Family :

TB10Cs3H1

Id:

RF01531

Type:

Gene; snRNA; snoRNA; HACA-box;

Taxonomy:

Eukaryota;

Ontology:

GO:0006396 RNA processingRF01531

Description:

not description

Score:

78.0

E-value:

6.2e-15

From sequence:

956343

To sequence:

956408

Alignments:

                                   v                        v                        NC
                 :<<<<<<----<<<-<<<<.<<<<<...._______>>>>>-->>>>>>>----->>>->>>::::: CS
  RF01531      1 AGCaGUGUCGCUAUGCGUc.cCCGc....caucaaUgCGGggcgACGGUACGAAaCACGuGCGAGAg 62    
                 AGCAGUGUCGCUAUGCGU  :CC:C    C+ C+AUG:GG:GC+ACGGUACGAAACACGUGCGAGA+
    chr36 956343 AGCAGUGUCGCUAUGCGU-cUCCACcucaCCCCGAUGCGGAGCAACGGUACGAAACACGUGCGAGAC 956408
                 ******************.5*********9************************************* PP

>>

RNAfold
>chr36_25
GCAGUGUCGCUAUGCGUCUCCACCUCACCCCGAUGCGGAGCAACGGUACG
AAACACGUGCGAGAC
(((((((..((((.(((((((.(.((.....)).).))))..)))))).)..)))).)))..... (-16.50)

Length sequence

: 65

Length match:

64