chr36_29

cmsearch-Rfam

Family :

TB10Cs5H3

Id:

RF01536

Type:

Gene; snRNA; snoRNA; HACA-box;

Taxonomy:

Eukaryota;

Ontology:

GO:0006396 RNA processingRF01536

Description:

not description

Score:

76.1

E-value:

4.8e-15

From sequence:

2243945

To sequence:

2243878

Alignments:

                                                                                         NC
                  :::<<<<<<<-----<<<------<<_____________>>------->>>------>>>>>>>:::::: CS
  RF01536       1 aAACggcAACUCUCUGGAUuCcUcggGCcauUUuUcuUcccgGUGcaaUCCUCAUCaGUUgccGaAGAaa 70     
                  AAAC::CAACUCUCUGG:UUCCUCG:G+  UUU+  +UC:C+GUG+AA:CCUCAUCAGUUG::G+AGA+A
    chr36 2243945 AAACGACAACUCUCUGGGUUCCUCGAGUACUUUC--AUCUCAGUGUAAUCCUCAUCAGUUGUUGGAGAGA 2243878
                  ********************************99..99******************************** PP

>>

RNAfold
>chr36_29
UCUCUCCAACAACUGAUGAGGAUUACACUGAGAUGAAAGUACUCGAGGAA
CCCAGAGAGUUGUCGUUUG
........((((((..((.((.((.(..((((((....)).))))..)))))))...))))))...... (-10.50)

Length sequence

: 69

Length match:

66