chr36_8

cmsearch-Rfam

Family :

mir-253

Id:

RF01064

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF01064

Description:

not description

Score:

33.9

E-value:

0.00026

From sequence:

757177

To sequence:

757086

Alignments:

                                                                                                                  NC
                 ::<<<<<--<<<<<<<<<<<<<<<<<<<-<<<.-<<<<<<<<<<____________>>>->>>>>>>>>>->->>>>>>>>>>>>>>>>>>--->> CS
  RF01064      1 aUcguuCgagucgCcgccCuucuCaCaCACCu.caCuaaCaCuaAccaCaGAUuuauaGAuGuuaGuaGGCGUuGuGggaaGggcgGcgacgauGa 95    
                 A C::    ::C:C:G:C:::C:CACACAC:: C:C::ACAC:: C+   G  U  ::G UGU::G:::G G UGUG:G:::G:C:G:G::G    
    chr36 757177 AACUU----CACACGGUCACACACACACACACaCGCACACACACGCUUAUGCAUGCGUG-UGUGUGCGUGUG-UGUGUGUGUGACCGUGUGGG--- 757091
                 **997....99999999999999999999999559999999999999999988889999.999999999999.99999999999999999987... PP

                       NC
                 >>>:: CS
  RF01064     96 acgua 100   
                 ::G  
    chr36 757090 GAGGG 757086
                 6999* PP

>>

RNAfold
>chr36_8
CCCCCCUCCCCACACGGUCACACACACACACACGCACACACACGCAUGCA
UAAGCGUGUGUGUGCGUGUGUGUGUGUGUGUGACCGUGUGAAGUUACGG
..........(((((((((((((((((((((((((((((((((((........))))))))))))..)))))))))))))))))))))))......... (-69.60)

Length sequence

: 99

Length match:

90