chr3_4

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

34.1

E-value:

0.00058

From sequence:

113894

To sequence:

114079

Alignments:

                                                v       v                                         NC
                 :<<<<<.-<<<<<<<<<<<<<<<<-<<<<<-<~~~~~~~>>>>>>>>>>>>>>>>>>>>>>-.>>>>>:::::::::::: CS
  RF00772      1 UGGggc.aGggGGGcaGgggGGGcUcAgGgAG*[ 13]*CcCcUggCCCcccCugCCCccCC.gccCCcugUuccaaaau 84    
                 UGG:G: AGG:GGG:AGG::G G: ::G GA         C C:::C C::CCU:CCC:CCC :C:CCC   +CC+ AA+
     chr3 113894 UGGAGAuAGGGGGGGAGGGAGGGAGGGGGGAA*[113]*CCUCCCUCUCUUCCUCCCCUCCCcUCCCCCCCCCCCCCAAA 114079
                 ******99999999999999999988888874....*..4777788899999999999999889**************** PP

>>

RNAfold
>chr3_4
GGAGAUAGGGGGGGAGGGAGGGAGGGGGGAAANNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUUUCCCCCCUCCCCUCCC
UCUCUUCCUCCCCUCCCCUCCCCCCCCCCCCCAAA
((((..((((((((((((((((((((((((((....................................................................................................)))))))))).))))))))))))))))...))))................... (-52.71)

Length sequence

: 185

Length match:

184