chr3_5

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

35.4

E-value:

0.00027

From sequence:

114075

To sequence:

113890

Alignments:

                                       v              v                                  NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<~~~~~~~>>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAg*[ 20]*cUggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                  GGGG:+G:GGG:::G::GGGG  :A:       :U: CCCC::C:::CCC:CC:CCCC+ + UCCA    
     chr3 114075 GGGGGGGGGGGGAGGGGAGGGGAGGAA*[122]*UUUCCCCCCUCCCUCCCUCCCCCCCUAUCUCCACUUG 113890
                 ********************9977775....*..56679999***************************** PP

>>

RNAfold
>chr3_5
AAGUGGAGAUAGGGGGGGAGGGAGGGAGGGGGGAAANNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUUUCCCCCCUCCCC
UCCCUCUCUUCCUCCCCUCCCCUCCCCCCCCCCCC
.((.((((..((((((((((((((((((((((((((....................................................................................................)))))))))).))))))))))))))))...)))).))............ (-54.31)

Length sequence

: 185

Length match:

184