chr3_6

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

33.0

E-value:

0.0012

From sequence:

69740

To sequence:

69681

Alignments:

                             v       v               v       v                         NC
                :<<<<<-<<<<<<<<<<<<<<<<-<<<~~~~~~>>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772     1 UGGggcaGggGGGcaGgggGGGcUcAg*[20]*cUggCCCcccCugCCCccCCgccCCcugUuccaaaau 84   
                UGGG   G:GGGG AGG:GGG : :AG      CU:: CCC:CCU CCCC:C   CCC+U UUCC+   +
     chr3 69740 UGGG---GGGGGGAAGGAGGGUGAGAG*[ 2]*CUCCUCCCCCCUCCCCCUC---CCCUUCUUCCUCCCC 69681
                **96...99999**************9...6..9***************999...69************* PP

>>

RNAfold
>chr3_6
GCCCAGGUGUAGGGGAGGAAGAAGGGGAGGGGGAGGGGGGAGGAGACCUC
UCACCCUCCUUCCCCCCCCCAAAGAACCUCUGC
.(((.......)))((((.....((((.((((((((((((..(((....)))..))))))))))))))))......))))... (-49.10)

Length sequence

: 83

Length match:

58