chr4_11

cmsearch-Rfam

Family :

mir-149

Id:

RF00829

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00829

Description:

not description

Score:

37.3

E-value:

0.0041

From sequence:

283382

To sequence:

283265

Alignments:

                                             v   v                         v  v                              NC
                 :<<<<<<<<<-<<<-<-<-<<<<<<-<<<<<-<<<<<-<-<<<~~~~~~>>>->>>>>>>>>>>->>>>>>->->->>>->>>>->>>>>: CS
  RF00829      1 GCCgGcGCCCAgGCUCUGGCcCCGuGcCucCACuCCCGuGcgc*[ 4]*gcgGaGGGaGGgaGgGaCGGgGGCuGUGCcGGGGCagCcGGa 89    
                  CCG:::CC: ::CUCU:GCC:C:: CC CC   CCC : C:C      G:G :GGG  GG GGG::G:GG : G G:: :GG: ::CGG 
     chr4 283382 CCCGUUACCUUCCCUCUUGCCUCCCCCCCCCCCUCCCCAUCUC*[35]*GAGAUGGGGAGG-GGGGGGAGGCAAGAGGGAAGGU-AACGGG 283265
                 **********************999888888777777444444...9..444445544443.445779***************9.99**** PP

RNAfold
>chr4_11
CCGUUACCUUCCCUCUUGCCUCCCCCCCCUCCCCAUCUCUUCUCUCGCGC
UGGGGGUAAGCAAGCGCGAGAGAAGAGAUGGGGAGGGGGGGGGGGAGGCA
AGAGGGAAGGUAACGGG
((((((((((((((((((((((((((((((((((((((((((((((((((((........).))))))))))))))))))))))...))))))))))))))))))))))))))))). (-115.00)

Length sequence

: 117

Length match:

116