chr4_12

cmsearch-Rfam

Family :

mir-14

Id:

RF00752

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00752

Description:

not description

Score:

28.6

E-value:

0.0045

From sequence:

65861

To sequence:

65776

Alignments:

                                         v       v                          NC
                <<<<<<<<-<<<<--<<<<<<-<<<<_~~~~~~>>>>->>>>>>-->>>>->>>>>>>> CS
  RF00752     1 uGUGGGAGCGAGAuuaaGaCUuaCUgG*[14]*uAGuCAGuCuuUUUCUCUCUCCUAUa 67   
                :: :GGAG GAGA  :AG:   :  GG         :C  :CU:U UCUCUCUCC: ::
     chr4 65861 CGGAGGAGAGAGAGAGAGGGGGGGGGG*[34]*-UCCCUCUCUCUCUCUCUCUCCUCCG 65776
                *****************9987766555...9...455667999999************* PP

RNAfold
>chr4_12
GGAGGAGAGAGAGAGAGAGAGGGAGGGAGGAAGGGAGAGAAGCGCGCACA
CGCACACUCCCCCCCCCCUCUCUCUCUCUCCUCCG
(((((((((((((((((...(((.(((.....(((((....(((......)))...)))))))))))))))))))))))))))). (-54.80)

Length sequence

: 85

Length match:

84