chr4_14

cmsearch-Rfam

Family :

mir-185

Id:

RF00771

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00771

Description:

not description

Score:

33.5

E-value:

0.0071

From sequence:

170766

To sequence:

170689

Alignments:

                          v                                   v           NC
                 <<<<<-<<<<<<<<<<<<-<<<<<<~~~~~~>>>>>>>>>>>>>>>>>>->>>>>: CS
  RF00771      1 GGGgguGagGGgcugGaGAGaaaGc*[31]*gCuuuCCuCcggcCCcuCccuCCCA 81    
                 G:GGG G:: GG::GGAGAG:::G:      :C:::CCUCC::CC ::C+CUC:C 
     chr4 170766 GAGGGGGGAAGGAGGGAGAGGGGGG*[28]*CCCUCCCUCCCUCCCUCCUCUCUCG 170689
                 ***********************98...*..89*********************** PP

RNAfold
>chr4_14
GCGAGAGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGCGCAAGAGUGAAAA
GAGCCCCCCCUCUCCCUCCUUCCCCCCUCCG
........((((((.(((((((((((((((.(((.((...............)).))).))))))))))))))))))))). (-54.20)

Length sequence

: 81

Length match:

76