chr4_19

cmsearch-Rfam

Family :

mir-207

Id:

RF00802

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00802

Description:

not description

Score:

39.4

E-value:

0.00046

From sequence:

154472

To sequence:

154547

Alignments:

                      v         v     v           vv          vv            v     v        v     NC
                 :<<<-<<<<<-<<<<<<--<<<<<<<<<<<<<<<<-<______>->>>>>->>>>>>>>>->>->>>>>>>>>>>>>>: CS
  RF00802      1 gagGcaGggGCGaGGgGCUGcggGgGgagCcggGCGGAGGCUGCGGCcugcGcuuCcCccggCUCcCCuCCccCuCcuU 79    
                 GAG   GGG: G GG G  G: GGGG:AG::::    AGGC G    :::+:CU:CCCC  :CUC CC C:CCC  CU 
     chr4 154472 GAGGAAGGGA-GGGGAGGAGAAGGGGGAGGGGGAG-GAGGCGGUC-CUCCUCCUCCCCCCUUCUCCCCUCUCCCCUCUC 154547
                 **********.55555558**********877666.78**99963.444458*************************** PP

>>

RNAfold
>chr4_19
GGAGGAAGGGAGGGGAGGAGAAGGGGGAGGGGGAGGAGGCGGUCCUCCUC
CUCCCCCCUUCUCCCCUCUCCCCUCUCCC
(((((..((((((((.(((((((((((((((((((((.....)))))))))).))))))))))))))))))).))))). (-67.10)

Length sequence

: 79

Length match:

74