chr4_20

cmsearch-Rfam

Family :

mir-207

Id:

RF00802

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00802

Description:

not description

Score:

40.8

E-value:

0.00022

From sequence:

154549

To sequence:

154473

Alignments:

                             v        v      v                       v      v         v           NC
                 :<<<-<<<<<-<<<<<<--<<<<<<<<<<<<<<<<-<______>->>>>>->>>>>>>>>->>-.>>>>>>>>>>>>>>: CS
  RF00802      1 gagGcaGggGCGaGGgGCUGcggGgGgagCcggGCGGAGGCUGCGGCcugcGcuuCcCccggCU.CcCCuCCccCuCcuU 79    
                 G:G: AGGG  G GG:G  G: GGGGG: :::GG GG   C GC  CC::C: :UCCCC  :CU C:CC C CCCU:C:U
     chr4 154549 GGGAGAGGGGAGAGGGG-AGAAGGGGGGAGGAGGAGG--ACCGCCUCCUCCCCCUCCCCCUUCUcCUCCCCUCCCUUCCU 154473
                 *****************.4899999999999999988..6889999999999999999998888466777778999**** PP

>>

RNAfold
>chr4_20
AGGAAGGGAGGGGAGGAGAAGGGGGAGGGGGAGGAGGCGGUCCUCCUCCU
CCCCCCUUCUCCCCUCUCCCCUCUCCCA
.(((.((((((((.(((((((((((((((((((((.....)))))))))).)))))))))))))))))))...))).. (-64.60)

Length sequence

: 78

Length match:

75