chr4_21

cmsearch-Rfam

Family :

mir-207

Id:

RF00802

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00802

Description:

not description

Score:

34.6

E-value:

0.0059

From sequence:

65865

To sequence:

65790

Alignments:

                   v          v               vv                vv                v        v    NC
                :<<<-<<<<<-<<<<<<--<<<<<<<<<<<<<<<<-<______>->>>>>->>>>>>>>>->>->>>>>>>>>>>>>>: CS
  RF00802     1 gagGcaGggGCGaGGgGCUGcggGgGgagCcggGCGGAGGCUGCGGCcugcGcuuCcCccggCUCcCCuCCccCuCcuU 79   
                +:: C G:GG GAG G:  G:GGG:GG:: ++G : G G  UGCG: C    ::UC:CCC :C :C CUCCC:C  ::U
     chr4 65865 AGAACGGAGGAGAGAGAGAGAGGGGGGGGGGAGUGUGCGUGUGCGCGC---UUCUCUCCCUUCCUCCCUCCCUCUCUCU 65790
                *****************************9999999*999999*9999...7899999999****************** PP

>>

RNAfold
>chr4_21
GAGAGAGAGGGAGGGAGGAAGGGAGAGAAGCGCGCACACGCACACUCCCC
CCCCCCUCUCUCUCUCUCCUCCGUUCUUA
(((((((((((((((.((..(((((....(((......)))...)))))..)))))))))))))))))........... (-44.70)

Length sequence

: 79

Length match:

74