chr4_31

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

35.7

E-value:

0.00023

From sequence:

170771

To sequence:

170686

Alignments:

                    v          v             v         v            v          v               NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<<-<~~~~~~>>>>>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgGgAG*[13]*CcCcUggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                  :G G AGG:GGG: GG:GGG:: :: G  G      C C ::::CCC:CC :CCC:CCC C C:C + UC++   +
     chr4 170771 CAGCGGAGGGGGGAAGGAGGGAGAGGGGGGG*[15]*CGCUCCCUCCCUCCCUCCCUCCCUCCCUCCUCUCUCGCGA 170686
                 ************************9999555...7..55889999******************************** PP

>>

RNAfold
>chr4_31
CGCGAGAGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGCGCAAGAGUGAAA
AGAGCCCCCCCUCUCCCUCCUUCCCCCCUCCGCUG
.(((.(((.((.(((((((((((((((.(((.(((..(.............)..))))))))))))))))))))))))))))).. (-55.80)

Length sequence

: 85

Length match:

84