chr4_37

cmsearch-Rfam

Family :

MIR408

Id:

RF00690

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00690

Description:

not description

Score:

28.2

E-value:

0.00053

From sequence:

65773

To sequence:

65869

Alignments:

                                               v           v                                 NC
                ::::::::::::::::<<<-<<<<<<<-<<<<<<-~~~~~~>>>>>>->>>>>>>->>>::::::::::::::::: CS
  RF00690     1 aauUGGugAugAgAugGAGACaGGGAagAgGCAGa*[66]*CUGCcUCuUCCCuGGCUCCuuucuCuccucuuUuu 136  
                 A+ GG+G  GAGA++GAGA AG:G:: :GG :GA      C: CC:C::C:CU  CUC +U CUC  +UCUU UU
     chr4 65773 CAACGGAGGAGAGAGAGAGAGAGAGGGAGGGAGGA*[27]*CCCCCCCCCCUCUCUCUCUCUCCUCCGUUCUUAUU 65869
                *****************************999883...6..88899999*************************** PP

>>

RNAfold
>chr4_37
AGGAAAGGAGCGAAACAUCCAACGGAGGAGAGAGAGAGAGAGAGGGAGGG
AGGAAGGGAGAGAAGCGCGCACACGCACACUCCCCCCCCCCUCUCUCUCU
CUCCUCCGUUCUUAUUUGUGCAUCGUCAUCUCUGUG
.(((.(.(((((........((((((((((((((((((((...(((.(((.....(((((....(((......)))...)))))))))))))))))))))))))))))))........))).)).)..)))..... (-63.60)

Length sequence

: 136

Length match:

95