chr4_43

cmsearch-Rfam

Family :

mir-574

Id:

RF00929

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00929

Description:

not description

Score:

37.0

E-value:

0.0035

From sequence:

72138

To sequence:

72242

Alignments:

                v  v      v            v                    v          v      v  v   NC
                <<<<<<<<<<<<-<-<<<<<<<<<<<<<<<<~~~~~~>>>>>>>>>>>>>>>>>>>>>>>>>>>>>:: CS
  RF00929     1 cGcGGGCGuGuGAGUGuGuGuGuguGaGuGu*[15]*aCgCuCaugCaCaCaCCCaCaCGCCCgCgCu 77   
                 GC :G:GUG G GUGUGUGUGU :G GUG:      :CGC C: GCACACACCC CAC:C: GC C 
     chr4 72138 UGCACGUGUGUGUGUGUGUGUGUGUGUGUGC*[43]*GCGCGCGAGCACACACCCCCACACGAGCCCG 72242
                ***********************99999998...9..8****************************** PP

>>

RNAfold
>chr4_43
GCACGUGUGUGUGUGUGUGUGUGUGUGUGCCCUCUUCGUGUUCUUGCGCU
CCAUGGCUCGCUUGCUUGCGUACGCGCGCGAGCACACACCCCCACACGAG
CCCG
((.((((((.((((((((.((((((((((((......((((....)))).....))).(((......))).))))))))).))))))))...)))))).))... (-43.50)

Length sequence

: 104

Length match:

103