chr4_44

cmsearch-Rfam

Family :

mir-574

Id:

RF00929

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00929

Description:

not description

Score:

44.3

E-value:

8.1e-05

From sequence:

74597

To sequence:

74705

Alignments:

                v  v      v            v                            v          v      v  v   NC
                <<<<<<<<<<<<-<-<<<<<<<<<<<<<<<<<--<~~~~~~>-->>>>>>>>>>>>>>>>>>>>>>>>>>>>>>:: CS
  RF00929     1 cGcGGGCGuGuGAGUGuGuGuGuguGaGuGuGUGu*[ 7]*gUCCaCgCuCaugCaCaCaCCCaCaCGCCCgCgCu 77   
                 GC :G:GUG G GUGUGUGUGU :G GUG GUG:      :U C CGC C: GCACACACCC CAC:C: GC C 
     chr4 74597 UGCACGUGUGUGUGUGUGUGUGUGUGUGUGUGUGC*[39]*GUACGCGCGCGAGCACACACCCCCACACGAGCCCA 74705
                ********************************997...*..789******************************** PP

>>

RNAfold
>chr4_44
GCACGUGUGUGUGUGUGUGUGUGUGUGUGUGUGCCCUCUUCGUGUUCUUG
CGCUCCAUGGCUCGCUUGCUUGCGUACGCGCGCGAGCACACACCCCCACA
CGAGCCCA
((.((((((.(.((((((((.((((((((((.(((......((((....)))).....))).(((......))))))))))))).)))))))).).)))))).))... (-45.80)

Length sequence

: 108

Length match:

107