chr4_47

cmsearch-Rfam

Family :

mir-574

Id:

RF00929

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00929

Description:

not description

Score:

39.8

E-value:

0.00081

From sequence:

81381

To sequence:

81487

Alignments:

                v  v      v            v                          v          v      v  v   NC
                <<<<<<<<<<<<-<-<<<<<<<<<<<<<<<<<--~~~~~~-->>>>>>>>>>>>>>>>>>>>>>>>>>>>>>:: CS
  RF00929     1 cGcGGGCGuGuGAGUGuGuGuGuguGaGuGuGUG*[ 9]*UCCaCgCuCaugCaCaCaCCCaCaCGCCCgCgCu 77   
                 GC :G:GUG G GUGUGUGUGU :G GUG G        U C CGC C: GCACACACCC CAC:C: GC C 
     chr4 81381 UGCACGUGUGUGUGUGUGUGUGUGUGUGUGUGCC*[39]*UACGCGCGCGAGCACACACCCCCACACGAGCCCG 81487
                **********************999999999865...9..66******************************** PP

>>

RNAfold
>chr4_47
GCACGUGUGUGUGUGUGUGUGUGUGUGUGUGCCCUCUUCGUGUUCUUGCG
CUCCAUGGCUCGCUUGCUUGCGUACGCGCGCGAGCACACACCCCCACACG
AGCCCG
((.((((((.((((((((.((((((((((.(((......((((....)))).....))).(((......))))))))))))).))))))))...)))))).))... (-44.70)

Length sequence

: 106

Length match:

105