chr4_48

cmsearch-Rfam

Family :

mir-657

Id:

RF00988

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00988

Description:

not description

Score:

28.9

E-value:

0.007

From sequence:

65874

To sequence:

65776

Alignments:

                                                                                                     NC
                :::::::::::::::::<----<<<-<<<<<<<<------<<<--~~~~~~>>>------->>>>>>>>->>>--->::::::: CS
  RF00988     1 GUaUAGuAGaGCUaGGAGGAGAGGGUCCugGaGaAGCGUGgaCgG*[20]*GucCUCACCCuCuCuaGGCCCCAUUCUCaUCUG 98   
                G A A    AG   GGAGGAGAG:G ::::G:G: G G GGA  G       UCCUC C C:C:C:::: C:C  UCUC+UC G
     chr4 65874 GCACAAAUAAGAACGGAGGAGAGAGAGAGAGGGGGG-GGGGAGUG*[22]*UUCCUCCCUCCCUCUCUCUCUCUCUCUCCUCCG 65776
                ********************9999999999999855.44666544...7..7889999999*********************** PP

RNAfold
>chr4_48
GGAGGAGAGAGAGAGAGAGAGGGAGGGAGGAAGGGAGAGAAGCGCGCACA
CGCACACUCCCCCCCCCCUCUCUCUCUCUCCUCCGUUCUUAUUUGUGC
(((((((.(((((((((((((((.(((.((...((((....(((......)))...)))))))))))))))))))))))))))).))).......... (-54.90)

Length sequence

: 98

Length match:

97