chr4_49

cmsearch-Rfam

Family :

mir-671

Id:

RF00891

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00891

Description:

not description

Score:

47.0

E-value:

1.2e-07

From sequence:

154478

To sequence:

154542

Alignments:

                                                                                        NC
                 :<<<<-<<-<<-<<<<<<<--<<<<<<<<<<<-~~~~~~->>>>>>>>>>>>>>>>>>->->>>->>>>: CS
  RF00891      1 GGaagAgGAGGAaGCCCuGGAgGggCuGGaGGU*[11]*UCCuCCgGuuCuCaGGGCuCCACCucuuuCG 75    
                 GG:A: :GAGGA::::::GGA:GG:::GGAGG       UCCUCC:::UC:C:::::: C CC:+:U:C 
     chr4 154478 GGGAGGGGAGGAGAAGGGGGAGGGGGAGGAGGC*[ 2]*UCCUCCUCCUCCCCCCUUCUC-CCCUCUCCC 154542
                 ********************************7...6..5********************.9999***** PP

>>

RNAfold
>chr4_49
GGAAGGGAGGGGAGGAGAAGGGGGAGGGGGAGGAGGCGGUCCUCCUCCUC
CCCCCUUCUCCCCUCUCCCCUCUC
(((.((((((((.(((((((((((((((((((((.....)))))))))).))))))))))))))))))).))). (-63.70)

Length sequence

: 74

Length match:

63