chr4_50

cmsearch-Rfam

Family :

mir-671

Id:

RF00891

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00891

Description:

not description

Score:

32.9

E-value:

0.00085

From sequence:

154549

To sequence:

154478

Alignments:

                                      vv           vv    vv            vv                    NC
                 :<<<<-<<-<<-<<<<<<<--<<<<<<<<<<<-<<<____>>>-->>>>>>>>>>>>>>>>>>->->>>->>>>: CS
  RF00891      1 GGaagAgGAGGAaGCCCuGGAgGggCuGGaGGUgauGGAUguuUUCCuCCgGuuCuCaGGGCuCCACCucuuuCG 75    
                 GG:A:A:G  G AG: ::G    G:::GGAGG :  GGA   : UCCUCC:::U  C:: :CUCC  C:C:U:C 
     chr4 154549 GGGAGAGG--GGAGAGGGGAGAAGGGGGGAGGAGGAGGACCGCCUCCUCCCCCUCCCCCUUCUCCU-CCCCUCCC 154478
                 *******7..77999999988888899999999999999999999*****9999999999999995.799***** PP

>>

RNAfold
>chr4_50
AGGGAGGGGAGGAGAAGGGGGAGGGGGAGGAGGCGGUCCUCCUCCUCCCC
CCUUCUCCCCUCUCCCCUCUCCCAC
.((((((((.(((((.(((((((((((.(((((.((....)).)))))))))))))))).))))))))))))).. (-62.70)

Length sequence

: 75

Length match:

70