chr4_51

cmsearch-Rfam

Family :

MIR815

Id:

RF00884

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00884

Description:

not description

Score:

39.0

E-value:

3.3e-05

From sequence:

283285

To sequence:

283359

Alignments:

                                                     vv     vv                                      NC
                 <<<<<<<<<<<<.<<-<<--<<<<<<<<-<<<<<-<<<_____>>>->>>>>-->>>>>>>>-->>->>->>>>>>>>>>>> CS
  RF00884      1 cUucccAauCUc.UcaAUUUCcUUcUCuAagAcaaaCuCUUAGgGuGugUuuGAgGAgAAgGGGAUUgAGgAGauUgggaAg 81    
                 C :CCC:::CUC :CA::U :::UCUC  :::C:+:   U AG  : :G:::   GAGA:::G ::UG:GGAG:::GGG: G
     chr4 283285 CUCCCCCCCCUCcCCAUCUCUUCUCUC--GCGCUGGGGGUAAG--CAAGCGC---GAGAGAAGAGAUGGGGAGGGGGGGGGG 283359
                 ************777666544444444..66666655555555..4566666...444444444667999************ PP

>>

RNAfold
>chr4_51
GCCUCCCCCCCCUCCCCAUCUCUUCUCUCGCGCUGGGGGUAAGCAAGCGC
GAGAGAAGAGAUGGGGAGGGGGGGGGGGAG
.((((((((((((((((((((((((((((((((((........).))))))))))))))))))))))))))))))))).. (-79.00)

Length sequence

: 80

Length match:

73