chr5_12

cmsearch-Rfam

Family :

mir-253

Id:

RF01064

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF01064

Description:

not description

Score:

34.6

E-value:

0.00017

From sequence:

85849

To sequence:

85950

Alignments:

                  v  v                                                                          v  v   NC
                ::<<<<<--<<<<<<<<<<<<<<<<<<<-<<<-<<<<<<~~~~~~>>>>.>>>>>->->>>>>>>>>>>>>>>>>>--->>>>>:: CS
  RF01064     1 aUcguuCgagucgCcgccCuucuCaCaCACCucaCuaaC*[21]*Guua.GuaGGCGUuGuGggaaGggcgGcgacgauGaacgua 100  
                 U :U C  :UC:CCGC:CU:::CAC:  :C: :CU:::      :::A G::G:C  :GUG:::AG:GCGG:GA:G  G A: + 
     chr5 85849 CUCCUCCCCCUCCCCGCGCUCUUCACC-GUCGGCCUGUG*[25]*CACAgGGCGAC--GGUGAAGAGCGCGGGGAGGGGGAAGACG 85950
                **************************6.57765554333...5..23330446666..6*************************** PP

>>

RNAfold
>chr5_12
UCCUCCCCCUCCCCGCGCUCUUCACCGUCGGCCUGUGACUUUGACGAAUA
CAUGAGAGAAGGCACAGGGCGACGGUGAAGAGCGCGGGGAGGGGGAAGAC
G
((.(((((((((((((((((((((((((((.((((((.((((..(..........)..)))))))))).))))))))))))))))))))))))))).)).. (-81.80)

Length sequence

: 101

Length match:

100