chr5_15

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

32.4

E-value:

0.0016

From sequence:

119876

To sequence:

119981

Alignments:

                   v                   v                        v                    v              NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<<-<---~~~~~~->>>>>>>>>>>>>>>>>>>>>>.->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgGgAGAAA*[ 9]*gCcCcUggCCCcccCugCCCccC.CgccCCcugUuccaaaau 84    
                 UG :G:+G:G :G::GGGGGGG  ::GG: GAA        C:CC:: CCCCCCC::C: C:C C:C: CC + U+C+   +
     chr5 119876 UGAAGAGGAGGAGACGGGGGGGAAGCGGA-GAAG*[31]*UCUCCGCCCCCCCCCGUCUUCUCuCUCCCCCCUCUUCCCUUC 119981
                 ******76666666666666666555555.7665...9..4555555666666666666666658***************** PP

>>

RNAfold
>chr5_15
GAAGAGGAGGAGACGGGGGGGAAGCGGAGAAGAGAUGGCCACCGUCACUU
ACUCGCUCUCUUCUCUCCGCCCCCCCCCGUCUUCUCUCUCCCCCCUCUUC
CCUUC
(((((((((((((((((((((..(((((((.((((.(((...............))).)))).))))))).))))))))))))))........)))))))..... (-57.60)

Length sequence

: 105

Length match:

104